BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D07LP1|AL426358
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1204 1562 0.0
>3x_Contig1204
Length = 5869
Score = 1562 bits (786), Expect = 0.0
Identities = 795/800 (99%)
Strand = Plus / Plus
Query: 1 ctcatcgcttcataaatttgatctgaatttaaagatttcgatttcaatgcatctctcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 ctcatcgcttcataaatttgatctgaatttaaagatttcgatttcaatgcatctctcgaa 1953
Query: 61 tgcttacaaatttagagaatagaattcataaagatgcaagcatacgaccaaatctttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 tgcttacaaatttagagaatagaattcataaagatgcaagcatacgaccaaatctttcca 2013
Query: 121 accaacctgcatgaatcatgtcaagccgtactgaaacttctaaaacaccagaatttggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 accaacctgcatgaatcatgtcaagccgtactgaaacttctaaaacaccagaatttggac 2073
Query: 181 tgtctggaagaaaaatcatctacgatgaagatggaaaaccgttcgtattttgcaacccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 tgtctggaagaaaaatcatctacgatgaagatggaaaaccgttcgtattttgcaacccta 2133
Query: 241 atatcgagaaacgaaataatcgaatttcagaaaacttttactaacgtttatgtactatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 atatcgagaaacgaaataatcgaatttcagaaaacttttactaacgtttatgtactatca 2193
Query: 301 atctagctgtcgttcatgcaatactttgttggactttcaatttgtgaccggcactttgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 atctagctgtcgttcatgcaatactttgttggactttcaatttgtgaccggcactttgaa 2253
Query: 361 ggctcggggaagcggcaattcttctgcttcaccagtggcggattccactcagtctcctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 ggctcggggaagcggcaattcttctgcttcaccagtggcggattccactcagtctcctgg 2313
Query: 421 ctccggtgaattagcagctggggccgcgacagatatttcaaatacttcagctgaccagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 ctccggtgaattagcagctggggccgcgacagatatttcaaatacttcagctgaccagcc 2373
Query: 481 actgttgattcctggatctaagacatactctaagtctgggcctgctgatgtcgaagagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 actgttgattcctggatctaagacatactctaagtctgggcctgctgatgtcgaagagct 2433
Query: 541 aggccgttcttcttggactttgttacatacgatagctgccaagtatamaaawaagccatc 600
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 2434 aggccgttcttcttggactttgttacatacgatagctgccaagtatccgaataagccatc 2493
Query: 601 ggacacacagaaacaagawatgaaacaatttatgaccatattctctcatgtttatccatg 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 ggacacacagaaacaagaaatgaaacaatttatgaccatattctctcatgtttatccatg 2553
Query: 661 cgggtggtgtgctaaggactttgaactatttataaaagagaacgcacccaaggttgattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2554 cgggtggtgtgctaaggactttgaactatttataaaagagaacgcacccaaggttgattc 2613
Query: 721 aaaagacgacttaggtagatggatttgtgcggcacataatgaagttaatgagaaattggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 aaaagacgacttaggtagatggatttgtgcggcacataatgaagttaatgagaaattggg 2673
Query: 781 aaaggagaaattcaactgcg 800
||||||||||||||||||||
Sbjct: 2674 aaaggagaaattcaactgcg 2693
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5958
Number of Sequences: 1807
Number of extensions: 5958
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)